Research at Kingston University

Abbass, J., Nebel, J.-C. and Mansour, N. (2013) Ab initio protein structure prediction: methods and challenges. In: Elloumi, M. and Zoyama, A. Y., (eds.) Biological knowledge discovery handbook: preprocessing, mining and postprocessing of biological data. New Jersey, U.S. : Wiley-Blackwell. (Computational techniques and engineering) ISBN 9781118132739 (In Press)

Moutzouris, A., Martinez del Rincon, J., Nebel, J.-C. and Makris, D. (2012) Human pose tracking by hierarchical manifold searching. In: International Conference on Pattern Recognition; 11 - 15 Nov 2012, Tsukuba, Japan.

Nebel, Jean-Christophe (2012) Proteomics and bioinformatics soon to resolve the human structural interactome. Journal of Proteomics & Bioinformatics, 5(10), xi-xii. ISSN (online) 0974-276X

Dyrka, Witold, Nebel, Jean-Christophe and Kotulska, Malgorzata (2012) Structural annotation of proteins using probabilistic context-free grammars. In: International Workshop on Machine Learning in Systems Biology 2012; 08 - 09 Sep 2012, Basel, Switzerland. (Unpublished)

Esmaielbeiki, Reyhaneh, Naughton, Declan and Nebel, Jean-Christophe (2012) Structure prediction of LDLR-HNP1 complex based on docking enhanced by LDLR binding 3D motif. Protein and Peptide Letters, 19(4), pp. 458-467. ISSN (print) 0929-8665

Thevenon, Jerome, Martinez del Rincon, Jesus, Dieny, Romain and Nebel, Jean-Christophe (2012) Dense pixel matching between unrectified and distorted images using dynamic programming. In: International Conference on Computer Vision Theory and Applications; 24 - 26 Feb 2012, Rome, Italy.

Istepanian, R. S. H., Sungoor, A. and Nebel, J.C. (2011) Comparative analysis of genomic signal processing for microarray data clustering. IEEE Transactions on Nanobioscience, 10(4), pp. 225-238. ISSN (print) 1536-1241

Moreno, I., Moreno, A., Donoso, M., Moraga, C., Nebel, J. C. and Orellana, A. (2011) Dissecting functional domains on nucleotide sugar transporters. In: XXXIV Reunión anual Sociedad de Bioquímica y Biología Molecular de Chile; 27-30 Sep 2011, Pedro de Valdivia, Chile. (Unpublished)

Moutzouris, Alexandros, Martinez del Rincon, Jesus, Lewandowski, Michal, Nebel, Jean-Christophe and Makris, Dimitrios (2011) Human pose tracking in low dimensional space enhanced by limb correction. In: IEEE International Conference on Image Processing; 11 - 14 Sep 2011, Brussels, Belgium.

Martínez del Rincón, J, Nebel, J.C. and Makris, D. (2011) Graph-based particle filter for human tracking with stylistic variations. In: 22nd British Machine Vision Conference; 29 Aug - 2 Sept 2011, Dundee, U.K..

Esmaielbeiki, Reyhaneh, Naughton, Declan P. and Nebel, Jean-Christophe (2011) Discovery of a 3D motif essential to LDLR-protein complexes: Application to docking prediction evaluation. In: 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology ; 17-19 July 2011, Vienna, Austria.

Lewandowski, Michal, Makris, Dimitrios and Nebel, Jean-Christophe (2011) Probabilistic feature extraction from time series using spatio-temporal constraints. In: 15th Pacific-Asia Conference on Knowledge Discovery and Data Mining; 24-27 May 2011, Shenzhen, China.

Dieny, Romain, Thevenon, Jerome, Martínez del Rincón, Jesus and Nebel, Jean-Christophe (2011) Bioinformatics inspired algorithm for stereo correspondence. In: International Conference on Computer Vision Theory and Applications; 05 - 07 Mar 2011, Vilamoura - Algarve, Portugal.

Kuo, Paul, Makris, Dimitrios and Nebel, Jean-Christophe (2011) Integration of bottom-up/top-down approaches for 2D pose estimation using probabilistic Gaussian modelling. Computer Vision and Image Understanding, 115(2), pp. 242-255. ISSN (print) 1077-3142

Nebel, J. C., Lewandowski, Micha, Thévenon, Jérôme, Martinez, Francisco and Velastin, Sergio (2011) Are current monocular computer vision systems for human action recognition suitable for visual surveillance applications? In: 7th International Symposium on Visual Computing; 26-28 Sep 2011, Las Vegas, USA.

Martinez del Rincon, J., Makris, D., Urunuela, C.O. and Nebel, J-C. (2011) Tracking human position and lower body parts using Kalman and particle filters constrained by human biomechanics. IEEE Transactions on Systems, Man, and Cybernetics, Part B: Cybernetics, 41(1), pp. 26-37. ISSN (print) 1083-4419

Lewandowski, Michal, Makris, Dimitrios and Nebel, Jean-Christophe (2010) Automatic configuration of spectral dimensionality reduction methods. Pattern Recognition Letters, 31(12), pp. 1720-1727. ISSN (print) 0167-8655

Dyrka, Witold, Nebel, Jean-Christophe and Kotulska, Malgorzata (2010) Towards 3D modeling of interacting TM helix pairs based on classification of helix pair sequences. In: 5th IAPR International Conference on Pattern Recognition in Bioinformatics; 22 Sept - 24 Sept 2010, Nijmegen, The Netherlands. ISBN 9783642160004

Lewandowski, Michal, Makris, Dimitrios and Nebel, Jean-Christophe (2010) View and style-independent action manifolds for human activity recognition. In: 11th European Conference on Computer Vision; 5 Sept - 11 Sept 2010, Crete, Greece.

Lewandowski, Michal, Makris, Dimitrios and Nebel, Jean-Christophe (2010) View and style-independent action manifolds for human activity recognition. In: BMVA Symposium: Temporal Pattern Learning and Recognition; 22 Sept 2010, London, U.K..

Lewandowski, Michal, Martínez del Rincón, Jesus, Makris, Dimitrios and Nebel, Jean-Christophe (2010) Temporal extension of Laplacian Eigenmaps for unsupervised dimensionality reduction of time series. In: 20th International Conference on Pattern Recognition; 23 Aug - 26 Aug 2010, Istanbul, Turkey. ISSN (print) 1051-4651 ISBN 9780769541099

Nebel, Jean-Christophe and Walawage, Claude Godfrey Charles (2010) Why inverse proteins are relatively abundant. Protein and peptide letters, 17(7), pp. 854-860. ISSN (print) 0929-8665

Dadgar, S. Amin, Nebel, Jean-Christophe and Makris, Dimitrios (2010) 3D pose estimation from silhouettes in cyclic activities encoded by a dense gaussians mixture model. In: International Conference on Computer Vision Theory and Applications (VISAPP 2010); 17 May - 21 May 2010, Angers, France.

Istepanian, R., Sungoor, A. and Nebel, J.-C. (2010) Genomic signal processing and microarray technologies for personalised healthcare. In: 1st AMA-IEEE Medical Technology Conference on Individualized Healthcare; 21 Mar - 23 Mar 2010, Washington, U.S.A..

Nebel, Jean-Christophe, Kuo, Paul and Makris, Dimitrios (2010) 2D and 3D pose recovery from a single uncalibrated video: A view and activity independent framework. In: Li, Weisi , Tao, Dacheng , Kacprzyk, Janusz , Khu, Li , Izquierdo, Ebroul and Wang, Haohong, (eds.) Multimedia Analysis, Processing and Communication. Berlin : Springer. pp. 391-411. (Studies in Computational Intelligence, no. 346) ISSN (print) 1860-949X ISBN 9783642195518

Lewandowski, M., Makris, D. and Nebel, J.-C. (2009) Automatic configuration of spectral dimensionality reduction methods for 3D human pose estimation. In: IEEE International Conference on Computer Vision 2009; 03 Oct 2009, Kyoto, Japan. (Unpublished)

Kuo, Paul, Makris, Dimitrios and Nebel, Jean-Christophe (2009) Activity independent 2D pose recovery from a single uncalibrated video. In: BMVA Symposium: Articulated Human Motion; 23 Oct 2009, London, U.K..

Lewandowski, Michal, Makris, Dimitrios and Nebel, Jean-Christophe (2009) A spatio-temporal extension of laplacian eigenmaps for nonlinear dimension reduction. In: BMVA Symposium: Articulated Human Motion; 23 Oct 2009, London, U.K..

Dyrka, Witold and Nebel, Jean-Christophe (2009) A stochastic context free grammar based framework for analysis of protein sequences. BMC Bioinformatics, 10(323), ISSN (online) 1471-2105

Konopka, Bogumil, Dyrka, Witold, Nebel, Jean-Christophe and Kotulska, Malgorzata (2009) Accuracy in predicting secondary structure of ionic channels. In: 1st International Conference on Computational Collective Intelligence; 5 Oct - 7 Oct 2009, Wroclaw, Poland. ISSN (print) 1860-949X ISBN 9783642039577

Konopka, Bogumil, Dyrka, Witold, Nebel, Jean-Christophe and Kotulska, Malgorzata (2009) Accuracy in Predicting Secondary Structure of Ionic Channels. In: Nguyen, Ngoc Thanh , Katarzyniak, Radoslaw Piotr and Janiak, Adam , (eds.) New Challenges in Computational Collective Intelligence. Berlin, Germany : Springer. pp. 315-326. (Studies in Computational Intelligence, no. 244) ISSN (print) 1860-949X ISBN 9783642039577

Darker, Iain T., Kuo, Paul, Yang, Ming Yuan, Blechko, Anastassia, Grecos, Christos, Makris, Dimitrios, Nebel, Jean-Christophe and Gale, Alastair G. (2009) Automation of the CCTV-mediated detection of individuals illegally carrying firearms: combining psychological and technological approaches. In: Visual Information Processing XVIII ; 14 April 2009, Orlando, U.S.A.. (Proceedings of the SPIE, no. 7341) ISBN 9780819476074

Nebel, Jean-Christophe (2009) Detection and annotation of ligand binding sites based on atomic descriptors. In: Protein Evolution - sequences, structures and systems; 26 Jan —27 Jan 2009, Cambridge, U.K.. (Biochemical Society / Wellcome Trust Focused Meeting)

Kuo, Paul, Ammar, Thibault, Lewandowski, Michal, Makris, Dimitrios and Nebel, Jean-Christophe (2009) Exploiting human bipedal motion constraints for 3D pose recovery from a single uncalibrated camera. In: Fourth International Conference on Computer Vision Theory and Applications; 5 Feb - 8 Feb 2009 , Lisboa, Portugal. (VISAPP)

Dyrka, Witold, Nebel, Jean-Christophe and Kotulska, Margaret (2008) Poster: Structure prediction of a protein channel based on probabilistic formal grammars and the continuous ion flow model. In: Gliwice Scientific Meetings; 21 - 22 Nov 2008, Gliwice, Poland.

Weheliye, Isakh, Deivachandran, Jeyaram and Nebel, Jean-Christophe (2008) PROTOPOLO: PROtein complex TOPOLOgy database. In: European Conference on Computational Biology; 22 Sept - 26 Sept 2008, Cagliari, Italy.

Dyrka, W., Kotulska, M and Nebel, J.-C. (2008) Structure prediction of a protein channel based on probabilistic formal grammars and the continuous ion flow model. In: European Conference on Computational Biology; 22 Sept - 26 Sept 2008, Cagliari, Italy.

Martínez, J., Nebel, J.-C., Makris, D. and Orrite, C. (2008) Tracking human body parts using particle filters constrained by human biomechanics. In: British Machine Vision Conference; 1 Sept - 4 Sept 2008, Leeds, U.K..

Istepanian, Robert S.H., Sungoor, Ala and Nebel, Jean-Christophe (2008) Fractal dimension and wavelet decomposition for robust microarray data clustering. In: 30th Annual International Conference of the IEEE-Engineering-in-Medicine-and-Biology-Society; 20 - 24 Aug 2008, Vancouver, Canada. ISSN (print) 1557-170X

Kuo, Paul, Makris, Dimitrios, Megherbi, Najla and Nebel, Jean-Christophe (2008) Integration of local image cues for Probabilistic 2D pose recovery. In: Bebis, George , Boyle, Richard , Parvin, Bahram , Koracin, Darko , Remagnino, Paolo , Porikli, Fatih , Peters, Jörg , Klosowski, James , Arns, Laura , Chun, Yu Ka , Rhyne, Theresa-Marie and Monroe, Laura , (eds.) Advances in Visual Computing. Berlin : Springer. pp. 214-223. (Lecture Notes in Computer Science, no. 5359) ISSN (print) 0302-9743 ISBN 9783540896456

Kuo, P., Nebel, J-C. and Makris, D. (2007) Camera auto-calibration from articulated motion. In: IEEE Conference on Advanced Video and Signal Based Surveillance; 5 Sept - 7 Sept 2007 , London, U.K.. ISBN 9781424416967

Nebel, Jean-Christophe, Herzyk, Pawel and Gilbert, David R. (2007) Automatic generation of 3D motifs for classification of protein binding sites. BMC Bioinformatics, 8, ISSN (online) 1471-2105

Istepanian, R.S.H., Sungoor, A. and Nebel, J-C. (2007) Linear predictive coding and wavelet decomposition for robust microarray data clustering. In: 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society ; 22 Aug - 26 Aug 2007 , Lyon, France. ISSN (print) 1557-170X ISBN 9781424407873

Istepanian, R. S. H., Sungoor, A. and Nebel, J.-C. (2007) Linear predictive coding for enhanced microarray data clustering. In: IEEE International Workshop on Genomic Signal Processing and Statistics; 10 - 12 Jun 2007 , Tuusula, Finland. ISBN 9781424409983

Dyrka, Witold and Nebel, Jean-Christophe (2007) Probabilistic context-free grammar for the detection of binding sites from a protein sequence. In: BioSysBio 2007: Systems Biology, Bioinformatics and Synthetic Biology; 11 Jan - 13 Jan 2007, Manchester, UK.

Nebel, Jean-Christophe (2006) Generation of 3D templates of active sites of proteins with rigid prosthetic groups. Bioinformatics, 22(10), pp. 1183-1189. ISSN (print) 1367-4803

Akbary-Gasany, Majid and Nebel, Jean-Christophe (2006) Description and comparison of protein quaternary structures. In: German Conference on Bioinformatics; 19 - 22 Sept 2006, Tuebingen, Germany.

Nebel, J.-C., Cockshott, W.P., Yarmolenko, V., Borland, E. and MacVicar, D. (2005) Pre-commercial 3-D digital TV studio. IEE Proceedings - Vision, Image and Signal Processing, 152(6), pp. 665-667. ISSN (online) 1350-245X

Nebel, Jean-Christophe (2005) Generation of 3D templates of active sites of proteins with rigid prosthetic groups. In: German Conference on Bioinformatics; 5-7 Oct 2005, Hamburg, Germany.

Nebel, Jean-Christophe (2005) Nestor3D: multiple alignment of protein structures based on ligand or prosthetic group position. In: BioSysBio: Bioinformatics and Systems Biology Conference; 14 July – 15 July 2005, Edinburgh, U.K..

Nebel, J.-C. (2005) Modelling of P450 active site based on Consensus 3D structures. In: The IASTED International Conference on Biomedical Engineering; 16 Feb – 18 Feb 2005, Innsbruck, Austria.

Ju, Xiangyang, Nebel, Jean-Christophe and Siebert, J. Paul (2005) 3D thermography imaging standardization technique for inflammation diagnosis. In: Gong, Haimei, (ed.) Infrared components and their applications. SPIE. pp. 266-273. (Proceedings of SPIE, no. 5640) ISBN 9780819455956

Cockshott, W. P., Hoff, S. and Nebel, J.-C. (2003) Experimental 3-D digital TV studio. IEE Proceedings - Vision, Image and Signal Processing, 150(1), pp. 28-33. ISSN (print) 1350-245X

Sibiryakov, Alexander, Ju, Xiangyang and Nebel, Jean-Christophe (2003) A New Automated Workflow for 3D Character Creation Based on 3D Scanned Data. In: Goos, G , Hartmanis, J. and van Leeuwen, J. , (eds.) Virtual Storytelling. Berlin, Germany : Springer-Verlag. pp. 155-158. (Lecture Notes in Computer Science, no. 2897) ISSN (print) 0302-9743 ISBN 9783540205357

Nebel, Jean-Christophe, Sibiryakov, Alexander and Ju, Xiangyang (2003) V-Man generation for 3-D real time animation. In: Symposium on Intelligent Motion and Interaction within Virtual Environments; 15 Sept - 17 Sept 2003, London, U.K..

Khambay, Balvinder, Nebel, Jean-Christophe, Bowman, Janet, Walker, Fraser, Hadley, Donald M. and Ayoub, Ashraf (2002) 3D stereophotogrammetric image superimposition onto 3D CT scan images: the future of orthognathic surgery. A pilot study. International Journal of Adult Orthodontics & Orthognathic Surgery, 17(4), pp. 331-341. ISSN (print) 0742-1931

Nebel, J.-C. and Sibiryakov , A. (2002) Range flow from stereo-temporal matching: application to skinning. In: Visualization, Imaging, and Image Processing; Sept 9 – Sept 12 2002, Marbella, Spain.

Nebel, Jean-Christophe (2001) Generation of True 3D Films. In: Goos, G. , Hartmanis, J. and van Leeuwen, J., (eds.) Virtual Storytelling Using Virtual Reality Technologies for Storytelling. Berlin, Germany : Springer. pp. 10-19. (Lecture Notes in Computer Science, no. 2197) ISSN (print) 0302-9743 ISBN 9783540426110

Nebel, Jean-Christophe (2001) Soft Tissue Modelling from 3D Scanned Data. In: Magnenat-Thalmann, Nadia and Thalmann, Daniel , (eds.) Deformable Avatars. AH Dordrecht, Netherlands : Kluwer Academic Publishers. pp. 85-97. (International Federation for Information Processing, no. 68) ISBN 9780792374466

Nebel, J.-C., Rodriguez-Miguel, F. J. and Cockshott, W.P. (2001) Stroboscopic stereo rangefinder. In: Third International Conference on 3-D Digital Imaging and Modeling ; 28 May - 1 Jun 2001 , Quebec City, Canada. ISBN 9780769509846

Nebel, Jean-Christophe (2000) Soft tissue modeling from 3D scanned data. In: IFIP TC5/WG5.10 DEFORM'2000 Workshop; 29 Nov - 30 Nov 2000, Geneva, Switzerland. ISBN 0792374460

Nebel, Jean-Christophe (2000) Realistic Collision Avoidance of Upper Limbs Based on Neuroscience Models. Computer Graphics Forum, 19(3), pp. 219-228. ISSN (print) 0167-7055

Nebel, J.-C. (1999) Keyframe animation of articulated figures using autocollision-free interpolation. In: 17th Annual Eurographics UK Conference; 13 Apr - 15 Apr 1999, Cambridge, U.K..

Faure, E., Faisstnauer, C., Hesina, G, Aubel, A., Escher, M., Labrosse, F., Nebel, J-C and Gascuel, J.-D. (1999) Collaborative animation over the network. In: Computer Animation; 26 May - 29 May 1999 , Geneva, Switzerland . ISBN 0769501672

Nebel, Jean-Christopher (1999) Keyframe interpolation with self-collision avoidance. In: Magnenat-Thalmann, Nadia and Thalmann, Daniel , (eds.) Computer Animation and Simulation '99. New York, U.S.A. : Springer. (Eurographics) ISBN 9783211833926

Nebel, J.-C. (1998) A new parallel algorithm provided by a numerical model. In: Second Eurographics workshop on Parallel Graphics and Visualisation; 24 - 25 Sept 1998, Rennes, France.

Nebel, J. (1998) A concurrent dataflow algorithm for ray tracing. In: Eurographics UK Conference; 25 Mar - 27 Mar 1998, Leeds, U.K..

Nebel, Jean-Christophe (1997) Developpement de techniques de lancer de rayon dans des geometries 3D adaptees aux machines massivement paralleles. (PhD thesis), L'Universite de St-Etienne.